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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939690.1_cds_XP_016484188.1_75228
CDS Infomation

[gene=LOC107804771] [db_xref=GeneID:107804771] [protein=choline transporter-like protein 2] [protein_id=XP_016484188.1] [location=complement(join(29662..29847,30311..30538,30858..31118,31465..31821,32732..32845,32935..33008,33241..33424,33849..33994,34178..34536,35435..35628))] [gbkey=CDS]
Sequence

ATGAAAATGAGAGGACCTTTAGGGGCAGTAATAGGGAGGCACCCTTCAAGCGATGGTACA
ACCCAAACAGGGGATGGTATAATCAAACACAACAGGAAATGTAGAGATGTTGTGTTTCTT
GTTATCTTCATTGCTTTCTGGGTTGCTATGATTGTCAATTCCAGCTTTGGATTTAACCAG
GGAAACCCATTGAGGCTAACATATGGGCTGGACTATAAAGGCAATGTTTGTGGTGATAGA
CATGCCGATCCAGATCTTCGTGAATTGGAACTCAGATACTGGTTGAACCCTAATCAAGTT
TATGAAAGTGGTTCAAAAGATAACCAGGCCAAGATTTCTAATGCCAGGACCATTTGCTTA
ATGGACTGCCCTATCCCATCAGAAGATTCTCTAAATTGGGTGTGTGACTATCCGGAGGGC
GAGGTTCGTATGTCAGTAGATGACTGGATCGATAGGAATTATGATTATTTTGCAGACCTT
ACTCCGGACCTAAGAAACACTTCTCTTCAGCTTCAAGGTCCTTGTTACCCTGTCATATTT
CCAAGTGTTAATGTTTATTGGAGCTGCCAGCTTATTGCCCGTGCATCGAATGTGTCTTTG
CGGCATTGGAGGGAGATGGGCGGTGTTAACATTGTTGAGGACATTGCAGTCGATAAATCC
ATCCATGGCTTAATTAACTCTCGATCGTTGGTCTTAAAGAGATATGTAGCTGATGTTGGT
AAGTCATGGGGAGTGTTGATTGTTTGTGGAGGGATTTTGCCAGTGTTTCTATCAGTGATA
TGGCTTTTGATGATTCGTCACTTAGTGGCTGCAATGCCTTGGATAACTGTCGTCCTCTTT
AATGCCCTTATTATTTCAGTCACAATGTTCTACTACTTGAAAGCTGGATGGATTGGCAAT
GACTCTATCTCCCCCATCATTGGTGAACATGATCCGTATTATCATGTGTCTGCAAGGGAA
ATAAGTCACCTCCATGCTGCTGCGGTTCTCATGACTGCTGTGATGATTATTTCGGTCTTG
TCATCCATCGCCATAGTGCGACGTATCCTTATGGCTACTTCTGTCCTGAAGGTAGCTGCT
AAGGTTATTGGAGAAGTACAAGCACTAATAATTTTCCCCATCATTCCATATGCTATCCTA
GCAATCTTCTACATGTTTTGGTTTTCAGCTGCACTTCATCTTTTTAGTTCTGGACGAATT
GTCCAGAATGATTGCAACACCAACTGCTGTGCGTATGATCTCAAATCAAAAAGAGTGAGC
TGCGATCGTTGCTGTGGATACAGTATCCAGTATACTTCTCATATTGGTGTTGCAATTCTT
TTCCACTTGTTTGGCTGCTATTGGGCCACACAGTTTTTCGTGGCAAGCTCTGCAACGGTT
ATTGCAGGCTCTGTTGCTACATACTATTGGTCTCGAGGCGGAACATTGCCAGAAATTTCA
TTTCTCCCAGTGTTCTCCTCTATGAAGCGGCTTATACGTTACAGCGTTGGATCTGTTGCT
CTTGGTTCGCTGATTGTTTCTTTTATAGAGTCTATCAGGTTTCTACTTGAAGCACTCCGG
CGTAAACTTAAAGTTGCTAATTCAGCACCAGAAAGTTGGGTTGGAAGAATGGTATATAAT
TCCTCACAAGGTTGCCTGCGGTGTATTAGTTGGATCATCAAATCTGTGAATCGTAATGCT
TACATCTTGATAGCTATAACAGGAAAGAGCTTTTTCAAGTCTTCTGAGATTGCAACTGAT
CTCATTATCAGCAACATCCTTCGGATCGGAAAGGTGAATGTCATTGGCGATGTTATTCTC
TTTCTTGGGAAGCTGTGTGTCAGTCTTGCAAGTGCACTTTTTGCTTTTCTCATGTTGGAT
ACTCACAAGTACAAGTCTGGACATAACAAGATCTCATCCCCAATATTCCCAGTGCTGGTC
TGCTGGAGTCTTGGCTACGTTGTGGCAACTCTTTTCTTTGCCGTTGTGGAGATGTCAATT
GATACCATAATACTTTCATTTTGCCAAGACTCAGAGGAGCACCAAGGAACCGCCCAATAC
GCCCCTCCTCTTCTTATTGAGACTTTGAATGACCAAAATGAGATGCAAAGACTTACACAA
TGA

Peptide Sequence

PEP ID

XP_016484188.1
PEP Infomation

PREDICTED: choline transporter-like protein 2 [Nicotiana tabacum]
Sequence

MKMRGPLGAVIGRHPSSDGTTQTGDGIIKHNRKCRDVVFLVIFIAFWVAMIVNSSFGFNQ
GNPLRLTYGLDYKGNVCGDRHADPDLRELELRYWLNPNQVYESGSKDNQAKISNARTICL
MDCPIPSEDSLNWVCDYPEGEVRMSVDDWIDRNYDYFADLTPDLRNTSLQLQGPCYPVIF
PSVNVYWSCQLIARASNVSLRHWREMGGVNIVEDIAVDKSIHGLINSRSLVLKRYVADVG
KSWGVLIVCGGILPVFLSVIWLLMIRHLVAAMPWITVVLFNALIISVTMFYYLKAGWIGN
DSISPIIGEHDPYYHVSAREISHLHAAAVLMTAVMIISVLSSIAIVRRILMATSVLKVAA
KVIGEVQALIIFPIIPYAILAIFYMFWFSAALHLFSSGRIVQNDCNTNCCAYDLKSKRVS
CDRCCGYSIQYTSHIGVAILFHLFGCYWATQFFVASSATVIAGSVATYYWSRGGTLPEIS
FLPVFSSMKRLIRYSVGSVALGSLIVSFIESIRFLLEALRRKLKVANSAPESWVGRMVYN
SSQGCLRCISWIIKSVNRNAYILIAITGKSFFKSSEIATDLIISNILRIGKVNVIGDVIL
FLGKLCVSLASALFAFLMLDTHKYKSGHNKISSPIFPVLVCWSLGYVVATLFFAVVEMSI
DTIILSFCQDSEEHQGTAQYAPPLLIETLNDQNEMQRLTQ

Transcript Sequence

Gene sequence data has not been registered.